EnhancerDB
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  3. rs142553223[chr1:235156493]
Enhancers that have rs142553223[chr1:235156493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235130325 235168235 enh997
Bone Marrow (K562) Liver Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs142553223[chr1:235156493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235155958 235156869 ZNF274 GTRD no Bone Marrow (K562) 21403182
chr1 235156079 235156839 ZNF274 GTRD no Cervix (HeLa-S3) 21403183
chr1 235156112 235156869 ZNF274 GTRD no Bone Marrow (K562) 21403184
chr1 235156163 235156586 ZNF143 GTRD no Epithelial (MCF-7) 21403185
chr1 235156210 235156681 ZNF274 GTRD no Bone Marrow (K562) 21403186
chr1 235156221 235156736 ZNF274 GTRD no Liver (HepG2) 21403187
chr1 235156232 235156567 ZNF274 GTRD no Cervix (HeLa-S3) 21403188
chr1 235156259 235156591 ZNF274 GTRD no Blood (GM12878) 21403189
chr1 235156278 235156536 ZNF274 GTRD no Cervix (HeLa-S3) 21403190
chr1 235156303 235156707 ZNF274 GTRD no Bone Marrow (K562) 21403191
chr1 235156311 235156642 ZNF274 GTRD no Blood (GM12878) 21403192
chr1 235156340 235156541 ZNF274 GTRD no Liver (HepG2) 21403193
chr1 235156491 235156504 NFKB1 JASPAR yes 36343461
Genes associated with rs142553223[chr1:235156493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More