EnhancerDB
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  3. rs142562975[chr1:16118704]
Enhancers that have rs142562975[chr1:16118704]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142562975[chr1:16118704]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16118689 16118708 CTCF JASPAR yes 27001604
chr1 16118698 16118715 ESR1 JASPAR yes 27001605
chr1 16118698 16118716 ESR2 JASPAR yes 27001606
chr1 16118699 16118714 ESR2 JASPAR yes 27001607
chr1 16118699 16118719 ESR1 JASPAR yes 27001608
chr1 16118700 16118704 LFA1 TRANSFAC yes 27001609
Genes associated with rs142562975[chr1:16118704], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More