EnhancerDB
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  3. rs142584116[chr11:12823993]
Enhancers that have rs142584116[chr11:12823993]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142584116[chr11:12823993]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12823797 12825137 ZNF274 GTRD no Bone Marrow (K562) 21471854
chr11 12823797 12825137 ZNF274 GTRD no Bone Marrow (K562) 107959368
chr11 12823806 12825399 ZNF274 GTRD no Bone Marrow (K562) 21471855
chr11 12823806 12825399 ZNF274 GTRD no Bone Marrow (K562) 107959369
chr11 12823876 12825061 ZNF274 GTRD no Liver (HepG2) 21471856
chr11 12823876 12825061 ZNF274 GTRD no Liver (HepG2) 107959370
chr11 12823919 12824958 ZNF274 GTRD no Bone Marrow (K562) 21471857
chr11 12823919 12824958 ZNF274 GTRD no Bone Marrow (K562) 107959371
chr11 12823963 12824613 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21471858
chr11 12823963 12824613 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107959372
chr11 12823980 12823994 NR2F1 JASPAR yes 37479596
chr11 12823989 12824000 CDX2 JASPAR yes 37479597
Genes associated with rs142584116[chr11:12823993], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More