EnhancerDB
  1. Home
  2. SNP
  3. rs142603466[chr5:173193825]
Enhancers that have rs142603466[chr5:173193825]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142603466[chr5:173193825]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173193239 173193880 TCF7L2 UCSC Txn Factor no Conserved 108537593
chr5 173193330 173193852 EP300 UCSC Txn Factor no Conserved 108537596
chr5 173193361 173193827 TCF12 UCSC Txn Factor no Conserved 108537597
chr5 173193509 173193885 TBP UCSC Txn Factor no Conserved 108537604
chr5 173193824 173193837 NFKB1 JASPAR yes 67902323
chr5 173193824 173193837 NFKB2 JASPAR yes 67902324
Genes associated with rs142603466[chr5:173193825], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More