EnhancerDB
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  3. rs142610541[chr5:172264989]
Enhancers that have rs142610541[chr5:172264989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142610541[chr5:172264989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172264788 172265104 EBF1 UCSC Txn Factor no Conserved 108537525
chr5 172264974 172264989 STAT1 JASPAR yes 67832784
chr5 172264987 172264996 SNAI2 JASPAR yes 67832787
Genes associated with rs142610541[chr5:172264989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More