EnhancerDB
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  3. rs142617558[chr1:8318854]
Enhancers that have rs142617558[chr1:8318854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8315293 8338815 enh11468
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Uterus Thyroid Pancreas Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs142617558[chr1:8318854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8318803 8319299 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107801970
chr1 8318853 8318863 NKX2-3 JASPAR yes 26535520
chr1 8318854 8318863 NKX2-8 JASPAR yes 26535521
Genes associated with rs142617558[chr1:8318854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More