EnhancerDB
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  3. rs142674452[chr12:125195571]
Enhancers that have rs142674452[chr12:125195571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142674452[chr12:125195571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125194329 125196454 ZNF274 GTRD no Bone Marrow (K562) 21582151
chr12 125194623 125195872 ZNF143 GTRD no Epithelial (MCF-7) 21582153
chr12 125195569 125195584 FOXP1 JASPAR yes 124411881
chr12 125195570 125195576 TBP TRANSFAC yes 124411882
chr12 125195570 125195585 FOXP1 JASPAR yes 124411883
chr12 125195570 125195591 IRF1 JASPAR yes 124411884
chr12 125195571 125195586 FOXP1 JASPAR yes 124411885
chr12 125195571 125195592 IRF1 JASPAR yes 124411886
Genes associated with rs142674452[chr12:125195571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More