EnhancerDB
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  3. rs142688438[chr1:182065473]
Enhancers that have rs142688438[chr1:182065473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182051005 182073915 enh12433
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Stomach Placenta Thyroid Uterus Lung (PC-9) Spleen Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs142688438[chr1:182065473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182065272 182065905 ZNF274 GTRD no Liver (HepG2) 21356937
chr1 182065360 182065912 ZNF274 GTRD no Bone Marrow (K562) 21356938
chr1 182065372 182065849 ZNF143 GTRD no Epithelial (MCF-7) 21356939
chr1 182065459 182065732 ZNF274 GTRD no Liver (HepG2) 21356940
chr1 182065466 182065487 IRF1 JASPAR yes 33589727
chr1 182065470 182065484 STAT1 JASPAR yes 33589728
chr1 182065470 182065485 STAT2 JASPAR yes 33589729
Genes associated with rs142688438[chr1:182065473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More