EnhancerDB
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  3. rs142706665[chr17:861623]
Enhancers that have rs142706665[chr17:861623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs142706665[chr17:861623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 861615 861628 SMAD2 JASPAR yes 52645401
chr17 861620 861628 TBX15 JASPAR yes 52645402
chr17 861620 861628 TBX4 JASPAR yes 52645403
chr17 861620 861629 ZEB1 JASPAR yes 52645404
chr17 861620 861632 PKNOX1 JASPAR yes 52645405
chr17 861620 861632 PKNOX2 JASPAR yes 52645406
chr17 861620 861632 TGIF1 JASPAR yes 52645407
chr17 861620 861632 TGIF2 JASPAR yes 52645408
chr17 861621 861631 ID4 JASPAR yes 52645409
chr17 861621 861631 TCF3 JASPAR yes 52645410
chr17 861621 861631 TCF4 JASPAR yes 52645411
chr17 861622 861631 SNAI2 JASPAR yes 52645412
chr17 861623 861628 USF2 TRANSFAC yes 52645413
Genes associated with rs142706665[chr17:861623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More