EnhancerDB
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  3. rs142716908[chr11:65184759]
Enhancers that have rs142716908[chr11:65184759]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142716908[chr11:65184759]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65180596 65184873 TCF7L2 GTRD no Colon (HCT116) 21491469
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977988
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977989
chr11 65183437 65204678 POLR2A UCSC Txn Factor no Conserved 107977990
chr11 65184077 65184845 TCF7L2 GTRD no Colon (HCT116) 21491680
chr11 65184589 65184929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107977991
chr11 65184674 65184938 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21491687
chr11 65184674 65184938 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107977992
chr11 65184751 65184764 TFAP2A JASPAR yes 39313457
chr11 65184751 65184764 TFAP2B JASPAR yes 39313458
chr11 65184751 65184764 TFAP2C JASPAR yes 39313459
chr11 65184759 65184763 LFA1 TRANSFAC yes 39313460
Genes associated with rs142716908[chr11:65184759], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More