EnhancerDB
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  3. rs142721609[chr5:79546547]
Enhancers that have rs142721609[chr5:79546547]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79539202 79550375 enh8515
Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs142721609[chr5:79546547]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79546544 79546548 LFA1 TRANSFAC yes 63712993
chr5 79546547 79546566 RFX2 JASPAR yes 63712994
Genes associated with rs142721609[chr5:79546547], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More