EnhancerDB
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  3. rs142724987[chr3:189804801]
Enhancers that have rs142724987[chr3:189804801]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 189786505 189806245 enh36260
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Stomach
Transcript factors that have rs142724987[chr3:189804801]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 189804798 189804808 EMX1 JASPAR yes 8620067
chr3 189804798 189804808 EMX2 JASPAR yes 8620068
chr3 189804798 189804808 GBX2 JASPAR yes 8620069
chr3 189804798 189804808 HOXB2 JASPAR yes 8620070
chr3 189804798 189804808 HOXB3 JASPAR yes 8620071
chr3 189804798 189804808 LHX6 JASPAR yes 8620072
chr3 189804798 189804808 MEOX1 JASPAR yes 8620073
chr3 189804798 189804808 MEOX2 JASPAR yes 8620074
chr3 189804798 189804808 MNX1 JASPAR yes 8620075
chr3 189804798 189804808 POU6F1 JASPAR yes 8620076
chr3 189804799 189804807 LMX1A JASPAR yes 8620077
chr3 189804799 189804807 LMX1B JASPAR yes 8620078
chr3 189804799 189804807 NKX6-1 JASPAR yes 8620079
chr3 189804799 189804807 NKX6-2 JASPAR yes 8620080
chr3 189804799 189804807 PDX1 JASPAR yes 8620081
chr3 189804799 189804807 VAX1 JASPAR yes 8620082
chr3 189804799 189804807 VAX2 JASPAR yes 8620083
chr3 189804799 189804807 VSX1 JASPAR yes 8620084
chr3 189804800 189804811 PHOX2A JASPAR yes 8620085
Genes associated with rs142724987[chr3:189804801], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More