EnhancerDB
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  3. rs142729311[chr1:27988861]
Enhancers that have rs142729311[chr1:27988861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142729311[chr1:27988861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27988859 27988874 FOXP1 JASPAR yes 27720138
chr1 27988860 27988875 FOXP1 JASPAR yes 27720139
chr1 27988861 27988876 FOXP1 JASPAR yes 27720140
Genes associated with rs142729311[chr1:27988861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More