EnhancerDB
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  3. rs142759026[chr16:3909385]
Enhancers that have rs142759026[chr16:3909385]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 3901576 3926575 enh3861
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142759026[chr16:3909385]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 3908641 3909522 ZNF143 GTRD no Epithelial (MCF-7) 108175383
chr16 3908721 3909518 ZNF143 GTRD no Epithelial (MCF-7) 108175384
chr16 3908728 3909534 ZNF143 GTRD no Epithelial (MCF-7) 108175385
chr16 3908745 3909539 ZNF143 GTRD no Epithelial (MCF-7) 108175386
chr16 3908748 3909464 ZNF143 GTRD no Epithelial (MCF-7) 108175387
chr16 3909382 3909395 NFKB1 JASPAR yes 9235960
chr16 3909382 3909395 NFKB2 JASPAR yes 9235961
chr16 3909385 3909396 CEBPB JASPAR yes 9235962
Genes associated with rs142759026[chr16:3909385], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More