EnhancerDB
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  3. rs142772338[chr6:47099315]
Enhancers that have rs142772338[chr6:47099315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142772338[chr6:47099315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47099304 47099318 TLX1 JASPAR yes 102001359
chr6 47099308 47099321 SMAD2 JASPAR yes 102001360
Genes associated with rs142772338[chr6:47099315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More