EnhancerDB
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  3. rs142790983[chr17:48962520]
Enhancers that have rs142790983[chr17:48962520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs142790983[chr17:48962520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48960649 48962526 ZNF274 GTRD no Liver (HepG2) 21770145
chr17 48960667 48962919 ZNF274 GTRD no Liver (HepG2) 21770146
chr17 48961878 48962538 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770226
chr17 48961884 48962534 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21770228
chr17 48961931 48963720 TCF7L2 GTRD no Colon (HCT116) 21770234
chr17 48962507 48962528 ZNF263 JASPAR yes 54728912
Genes associated with rs142790983[chr17:48962520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More