EnhancerDB
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  3. rs142828946[chr17:78646890]
Enhancers that have rs142828946[chr17:78646890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs142828946[chr17:78646890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78646878 78646897 PAX5 JASPAR yes 56265969
chr17 78646889 78646893 H1TF2 TRANSFAC yes 56265970
chr17 78646889 78646893 NFE TRANSFAC yes 56265971
chr17 78646889 78646893 SRF TRANSFAC yes 56265972
Genes associated with rs142828946[chr17:78646890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More