EnhancerDB
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  3. rs142844314[chr16:89509480]
Enhancers that have rs142844314[chr16:89509480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89499432 89527658 enh16907
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142844314[chr16:89509480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89506678 89509524 ZNF274 GTRD no Liver (HepG2) 21738546
chr16 89506678 89509524 ZNF274 GTRD no Liver (HepG2) 108226215
chr16 89506681 89509556 ZNF274 GTRD no Bone Marrow (K562) 108226216
chr16 89506815 89509528 ZNF143 GTRD no Epithelial (MCF-7) 21738558
chr16 89506815 89509528 ZNF143 GTRD no Epithelial (MCF-7) 108226234
chr16 89506818 89510107 TCF7L2 GTRD no Colon (HCT116) 21738559
chr16 89506818 89510107 TCF7L2 GTRD no Colon (HCT116) 108226235
chr16 89506860 89509776 ZNF143 GTRD no Epithelial (MCF-7) 21738563
chr16 89506860 89509776 ZNF143 GTRD no Epithelial (MCF-7) 108226244
chr16 89506901 89509491 ZNF143 GTRD no Epithelial (MCF-7) 21738564
chr16 89506901 89509491 ZNF143 GTRD no Epithelial (MCF-7) 108226248
chr16 89507331 89509567 ZNF143 GTRD no Epithelial (MCF-7) 21738582
chr16 89507331 89509567 ZNF143 GTRD no Epithelial (MCF-7) 108226276
chr16 89507436 89509607 TCF7L2 GTRD no Colon (HCT116) 21738594
chr16 89507436 89509607 TCF7L2 GTRD no Colon (HCT116) 108226295
chr16 89509467 89509481 TLX1 JASPAR yes 12344890
chr16 89509467 89509485 ESR2 JASPAR yes 12344891
chr16 89509468 89509485 ESR1 JASPAR yes 12344892
chr16 89509468 89509486 ESR1 JASPAR yes 12344893
chr16 89509478 89509492 RXRB JASPAR yes 12344894
Genes associated with rs142844314[chr16:89509480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More