EnhancerDB
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  3. rs142857045[chr1:39859930]
Enhancers that have rs142857045[chr1:39859930]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142857045[chr1:39859930]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39859918 39859930 PBX1 JASPAR yes 28272912
chr1 39859919 39859933 ONECUT2 JASPAR yes 28272913
chr1 39859919 39859933 ONECUT3 JASPAR yes 28272914
chr1 39859922 39859934 PBX1 JASPAR yes 28272915
chr1 39859923 39859937 ONECUT2 JASPAR yes 28272916
chr1 39859923 39859937 ONECUT3 JASPAR yes 28272917
chr1 39859926 39859938 PBX1 JASPAR yes 28272918
chr1 39859927 39859941 ONECUT2 JASPAR yes 28272919
chr1 39859927 39859941 ONECUT3 JASPAR yes 28272920
chr1 39859930 39859942 PBX1 JASPAR yes 28272921
Genes associated with rs142857045[chr1:39859930], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More