EnhancerDB
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  3. rs142870918[chr17:55540521]
Enhancers that have rs142870918[chr17:55540521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142870918[chr17:55540521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55539307 55541179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773526
chr17 55539307 55541179 POLR2A UCSC Txn Factor no Conserved 108274069
chr17 55539307 55541179 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274070
chr17 55540178 55540742 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773527
chr17 55540178 55540742 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274071
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 21773528
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 108274072
chr17 55540274 55541310 ZBTB33 GTRD no Lung (A549) 21773529
chr17 55540274 55541310 ZBTB33 GTRD no Lung (A549) 108274073
chr17 55540287 55540787 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773530
chr17 55540287 55540787 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274074
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 21773531
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 108274075
chr17 55540322 55541084 ZBTB33 GTRD no Lung (A549) 21773532
chr17 55540322 55541084 ZBTB33 GTRD no Lung (A549) 108274076
chr17 55540328 55541147 ZBTB33 GTRD no Lung (A549) 21773533
chr17 55540328 55541147 ZBTB33 GTRD no Lung (A549) 108274077
chr17 55540384 55541332 ZBTB33 GTRD no Lung (A549) 21773534
chr17 55540384 55541332 ZBTB33 GTRD no Lung (A549) 108274078
chr17 55540389 55541167 ZBTB33 GTRD no Lung (A549) 21773535
chr17 55540389 55541167 ZBTB33 GTRD no Lung (A549) 108274079
chr17 55540412 55541121 ZBTB33 GTRD no Brain (SK-N-SH) 21773536
chr17 55540412 55541121 ZBTB33 GTRD no Brain (SK-N-SH) 108274080
chr17 55540413 55540615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773537
chr17 55540413 55540615 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274081
chr17 55540414 55541186 ZBTB33 GTRD no Lung (A549) 21773538
chr17 55540414 55541186 ZBTB33 GTRD no Lung (A549) 108274082
chr17 55540443 55540763 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773539
chr17 55540443 55540763 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274083
chr17 55540448 55541147 ZBTB33 GTRD no Brain (SK-N-SH) 21773540
chr17 55540448 55541147 ZBTB33 GTRD no Brain (SK-N-SH) 108274084
chr17 55540449 55541235 ZBTB33 GTRD no Lung (A549) 21773541
chr17 55540449 55541235 ZBTB33 GTRD no Lung (A549) 108274085
chr17 55540454 55540794 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773542
chr17 55540454 55540794 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274086
chr17 55540454 55541126 ZBTB33 GTRD no Brain (SK-N-SH) 21773543
chr17 55540454 55541126 ZBTB33 GTRD no Brain (SK-N-SH) 108274087
chr17 55540471 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 21773544
chr17 55540471 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 108274088
chr17 55540478 55541137 ZBTB33 GTRD no Lung (A549) 21773545
chr17 55540478 55541137 ZBTB33 GTRD no Lung (A549) 108274089
chr17 55540486 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 21773546
chr17 55540486 55541111 ZBTB33 GTRD no Brain (SK-N-SH) 108274090
chr17 55540487 55540927 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773547
chr17 55540487 55540927 NFIC UCSC Txn Factor no Conserved 108274091
chr17 55540487 55540927 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274092
chr17 55540488 55540728 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773548
chr17 55540488 55540728 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274093
chr17 55540498 55541124 ZBTB33 GTRD no Lung (A549) 21773549
chr17 55540498 55541124 ZBTB33 GTRD no Lung (A549) 108274094
chr17 55540505 55541254 ZNF274 GTRD no Cervix (HeLa-S3) 21773550
chr17 55540505 55541254 ZNF274 GTRD no Cervix (HeLa-S3) 108274095
chr17 55540508 55541135 ZBTB33 GTRD no Lung (A549) 21773551
chr17 55540508 55541135 ZBTB33 GTRD no Lung (A549) 108274096
chr17 55540509 55540530 REST JASPAR yes 54957416
chr17 55540510 55540529 REST JASPAR yes 54957417
chr17 55540513 55540703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773552
chr17 55540513 55540703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274097
chr17 55540513 55540926 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773553
chr17 55540513 55540926 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274098
chr17 55540513 55540935 RELA UCSC Txn Factor no Conserved 108274099
chr17 55540520 55541081 ZBTB33 GTRD no Brain (SK-N-SH) 21773554
chr17 55540520 55541081 ZBTB33 GTRD no Brain (SK-N-SH) 108274100
chr17 55540521 55540889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21773555
chr17 55540521 55540889 RUNX3 UCSC Txn Factor no Conserved 108274101
chr17 55540521 55540889 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108274102
Genes associated with rs142870918[chr17:55540521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More