EnhancerDB
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  3. rs142872953[chr12:46804136]
Enhancers that have rs142872953[chr12:46804136]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46792249 46810655 enh47577
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Stomach Thyroid Peripheral Blood (MM.1S) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs142872953[chr12:46804136]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46803045 46804522 ZBTB33 GTRD no Brain (SK-N-SH) 108027111
chr12 46803994 46804522 ZNF274 GTRD no Liver (HepG2) 21541435
chr12 46803994 46804522 ZNF274 GTRD no Liver (HepG2) 108027112
chr12 46804028 46804468 ZNF274 GTRD no Liver (HepG2) 21541436
chr12 46804028 46804468 ZNF274 GTRD no Liver (HepG2) 108027113
chr12 46804045 46804481 ZNF274 GTRD no Liver (HepG2) 21541437
chr12 46804045 46804481 ZNF274 GTRD no Liver (HepG2) 108027114
chr12 46804133 46804144 NFIL3 JASPAR yes 120617543
chr12 46804134 46804138 YY1 TRANSFAC yes 120617544
chr12 46804134 46804146 HLF JASPAR yes 120617545
chr12 46804136 46804150 POU4F1 JASPAR yes 120617546
chr12 46804136 46804152 POU4F2 JASPAR yes 120617547
chr12 46804136 46804152 POU4F3 JASPAR yes 120617548
Genes associated with rs142872953[chr12:46804136], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More