EnhancerDB
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  3. rs142874606[chr1:234681625]
Enhancers that have rs142874606[chr1:234681625]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 234681324 234681701 vista5610
VISTA
Transcript factors that have rs142874606[chr1:234681625]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234681613 234682069 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21394312
chr1 234681613 234682069 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107880438
chr1 234681617 234682077 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394313
chr1 234681617 234682077 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107880439
chr1 234681618 234681630 E2F8 JASPAR yes 36286617
chr1 234681618 234681630 E2F8 JASPAR yes 118483319
Genes associated with rs142874606[chr1:234681625], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More