EnhancerDB
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  3. rs142917670[chr3:188002423]
Enhancers that have rs142917670[chr3:188002423]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187996529 188025195 enh48785
Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr3 188002342 188002742 vista43546
VISTA
Transcript factors that have rs142917670[chr3:188002423]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188002414 188002425 GCM1 JASPAR yes 8466812
chr3 188002414 188002425 GCM1 JASPAR yes 71103575
chr3 188002415 188002425 GCM2 JASPAR yes 8466813
chr3 188002415 188002425 GCM2 JASPAR yes 71103576
Genes associated with rs142917670[chr3:188002423], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More