EnhancerDB
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  3. rs142920640[chr6:88428030]
Enhancers that have rs142920640[chr6:88428030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs142920640[chr6:88428030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88428016 88428032 POU4F2 JASPAR yes 103324219
chr6 88428016 88428032 POU4F3 JASPAR yes 103324220
chr6 88428017 88428032 FOXA1 JASPAR yes 103324221
chr6 88428018 88428032 POU4F1 JASPAR yes 103324222
chr6 88428019 88428031 FOXC2 JASPAR yes 103324223
chr6 88428020 88428031 FOXB1 JASPAR yes 103324224
chr6 88428020 88428031 FOXC1 JASPAR yes 103324225
Genes associated with rs142920640[chr6:88428030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More