EnhancerDB
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  3. rs142941898[chr17:80510073]
Enhancers that have rs142941898[chr17:80510073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80480565 80515355 enh4649
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142941898[chr17:80510073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80510062 80510083 IRF1 JASPAR yes 56373936
chr17 80510064 80510085 IRF1 JASPAR yes 56373937
chr17 80510068 80510082 IRF7 JASPAR yes 56373938
chr17 80510068 80510089 IRF1 JASPAR yes 56373939
chr17 80510069 80510084 FOXP1 JASPAR yes 56373940
Genes associated with rs142941898[chr17:80510073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More