EnhancerDB
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  3. rs142972205[chr16:25001473]
Enhancers that have rs142972205[chr16:25001473]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24992965 25014102 enh3954
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs142972205[chr16:25001473]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 25001466 25001478 MEF2D JASPAR yes 10092864
chr16 25001469 25001483 TCF7L2 JASPAR yes 10092865
chr16 25001469 25001484 LEF1 JASPAR yes 10092866
chr16 25001471 25001479 GATA3 JASPAR yes 10092867
Genes associated with rs142972205[chr16:25001473], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More