EnhancerDB
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  3. rs142975616[chr6:16683966]
Enhancers that have rs142975616[chr6:16683966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 16667585 16734115 enh23080
Liver Astrocyte Colon (HCT116) Adrenal Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142975616[chr6:16683966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 16683875 16684391 TFAP2C UCSC Txn Factor no Conserved 108538894
chr6 16683961 16683972 TFAP2A JASPAR yes 100326919
chr6 16683961 16683972 TFAP2B JASPAR yes 100326920
Genes associated with rs142975616[chr6:16683966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More