EnhancerDB
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  3. rs142980191[chr1:19800228]
Enhancers that have rs142980191[chr1:19800228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142980191[chr1:19800228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19800222 19800234 HES5 JASPAR yes 27195543
chr1 19800222 19800234 HES7 JASPAR yes 27195544
chr1 19800222 19800238 T JASPAR yes 27195545
chr1 19800223 19800233 BHLHE40 JASPAR yes 27195546
chr1 19800223 19800233 BHLHE41 JASPAR yes 27195547
chr1 19800223 19800233 HEY1 JASPAR yes 27195548
chr1 19800223 19800233 HEY2 JASPAR yes 27195549
chr1 19800223 19800233 MAX JASPAR yes 27195550
chr1 19800223 19800233 MNT JASPAR yes 27195551
chr1 19800223 19800233 TFE3 JASPAR yes 27195552
chr1 19800223 19800233 TFEB JASPAR yes 27195553
chr1 19800225 19800230 MYC TRANSFAC yes 27195554
chr1 19800225 19800230 USF1 TRANSFAC yes 27195555
chr1 19800225 19800230 USF2 TRANSFAC yes 27195556
Genes associated with rs142980191[chr1:19800228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More