EnhancerDB
  1. Home
  2. SNP
  3. rs142986084[chr17:55987341]
Enhancers that have rs142986084[chr17:55987341]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142986084[chr17:55987341]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55987327 55987348 IRF1 JASPAR yes 54997854
chr17 55987332 55987352 RREB1 JASPAR yes 54997855
chr17 55987333 55987354 IRF1 JASPAR yes 54997856
chr17 55987337 55987349 IRF1 JASPAR yes 54997857
chr17 55987337 55987357 RREB1 JASPAR yes 54997858
chr17 55987338 55987359 IRF1 JASPAR yes 54997859
chr17 55987339 55987345 TCF4 TRANSFAC yes 54997860
chr17 55987339 55987354 FOXP1 JASPAR yes 54997861
Genes associated with rs142986084[chr17:55987341], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More