EnhancerDB
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  3. rs142993497[chr12:125260877]
Enhancers that have rs142993497[chr12:125260877]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs142993497[chr12:125260877]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125260536 125261298 ZNF143 GTRD no Epithelial (MCF-7) 21583118
chr12 125260663 125261419 ZNF143 GTRD no Epithelial (MCF-7) 21583119
chr12 125260678 125261470 ZNF143 GTRD no Epithelial (MCF-7) 21583120
chr12 125260699 125261089 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21583121
chr12 125260711 125261220 ZBTB33 GTRD no Lung (A549) 21583122
chr12 125260748 125261222 ZNF143 GTRD no Epithelial (MCF-7) 21583123
chr12 125260754 125261425 ZNF143 GTRD no Epithelial (MCF-7) 21583124
chr12 125260783 125261202 ZNF143 GTRD no Epithelial (MCF-7) 21583125
chr12 125260801 125261256 ZNF143 GTRD no Epithelial (MCF-7) 21583126
chr12 125260814 125261218 ZBTB33 GTRD no Lung (A549) 21583127
chr12 125260864 125260879 NR2C2 JASPAR yes 124421019
chr12 125260869 125260879 TBR1 JASPAR yes 124421020
chr12 125260869 125260880 TBX20 JASPAR yes 124421021
chr12 125260871 125261408 ZNF274 GTRD no Liver (HepG2) 21583128
Genes associated with rs142993497[chr12:125260877], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More