EnhancerDB
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  3. rs142996598[chr12:125246580]
Enhancers that have rs142996598[chr12:125246580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125246325 125246717 vista15337
VISTA
Transcript factors that have rs142996598[chr12:125246580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125245882 125247075 AR GTRD no Prostate (PC-3) 21582885
chr12 125245882 125247075 AR GTRD no Prostate (PC-3) 108069860
chr12 125246013 125246666 ZNF143 GTRD no Epithelial (MCF-7) 21582887
chr12 125246013 125246666 ZNF143 GTRD no Epithelial (MCF-7) 108069862
chr12 125246105 125246587 ZNF143 GTRD no Epithelial (MCF-7) 21582888
chr12 125246105 125246587 ZNF143 GTRD no Epithelial (MCF-7) 108069863
chr12 125246224 125246629 ZNF143 GTRD no Epithelial (MCF-7) 21582889
chr12 125246224 125246629 ZNF143 GTRD no Epithelial (MCF-7) 108069864
chr12 125246569 125246580 FLI1 JASPAR yes 82498165
chr12 125246569 125246580 FLI1 JASPAR yes 124419025
chr12 125246570 125246583 ELF1 JASPAR yes 82498166
chr12 125246570 125246583 ELF1 JASPAR yes 124419026
Genes associated with rs142996598[chr12:125246580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More