EnhancerDB
  1. Home
  2. SNP
  3. rs143011966[chr3:149279824]
Enhancers that have rs143011966[chr3:149279824]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 149269565 149284575 enh21021
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Muscle (A673) Placenta Colon (HCT116) Breast Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Stomach
Transcript factors that have rs143011966[chr3:149279824]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 149279816 149279828 PKNOX1 JASPAR yes 6505617
chr3 149279816 149279828 TGIF1 JASPAR yes 6505618
chr3 149279817 149279827 FIGLA JASPAR yes 6505619
chr3 149279817 149279827 ID4 JASPAR yes 6505620
chr3 149279817 149279827 TCF3 JASPAR yes 6505621
chr3 149279817 149279827 TCF4 JASPAR yes 6505622
chr3 149279818 149279827 SNAI2 JASPAR yes 6505623
chr3 149279819 149279824 USF2 TRANSFAC yes 6505624
Genes associated with rs143011966[chr3:149279824], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More