EnhancerDB
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  3. rs143093009[chr1:234900498]
Enhancers that have rs143093009[chr1:234900498]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143093009[chr1:234900498]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234897364 234901169 ZNF274 GTRD no Cervix (HeLa-S3) 21397677
chr1 234898757 234900914 ZNF274 GTRD no Bone Marrow (K562) 21397686
chr1 234898778 234900508 ZNF274 GTRD no Bone Marrow (K562) 21397688
chr1 234899878 234900502 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21397731
chr1 234900453 234901107 ZNF274 GTRD no Bone Marrow (K562) 21397732
chr1 234900469 234901101 ZNF274 GTRD no Bone Marrow (K562) 21397733
Genes associated with rs143093009[chr1:234900498], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More