EnhancerDB
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  3. rs143105540[chr1:39856264]
Enhancers that have rs143105540[chr1:39856264]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143105540[chr1:39856264]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39856254 39856264 TEAD1 JASPAR yes 28272327
chr1 39856254 39856264 TEAD4 JASPAR yes 28272328
chr1 39856254 39856266 TEAD1 JASPAR yes 28272329
chr1 39856258 39856265 SPIB JASPAR yes 28272331
Genes associated with rs143105540[chr1:39856264], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More