EnhancerDB
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  3. rs143173424[chr5:79482200]
Enhancers that have rs143173424[chr5:79482200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143173424[chr5:79482200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79482190 79482200 SREBF2 JASPAR yes 63703492
chr5 79482190 79482201 USF1 JASPAR yes 63703493
chr5 79482190 79482201 USF2 JASPAR yes 63703494
chr5 79482193 79482206 NFKB1 JASPAR yes 63703495
chr5 79482198 79482204 ZNF354C JASPAR yes 63703496
Genes associated with rs143173424[chr5:79482200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More