EnhancerDB
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  3. rs143220642[chr16:85219471]
Enhancers that have rs143220642[chr16:85219471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143220642[chr16:85219471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85219078 85220948 ZNF143 GTRD no Epithelial (MCF-7) 21720572
chr16 85219228 85220950 ZNF143 GTRD no Epithelial (MCF-7) 21720573
chr16 85219284 85220792 ZNF143 GTRD no Epithelial (MCF-7) 21720574
chr16 85219365 85220968 ZNF143 GTRD no Epithelial (MCF-7) 21720575
chr16 85219371 85220804 ZNF143 GTRD no Epithelial (MCF-7) 21720576
chr16 85219373 85220976 ZNF143 GTRD no Epithelial (MCF-7) 21720577
chr16 85219408 85220930 ZNF274 GTRD no Liver (HepG2) 21720578
chr16 85219457 85219472 ZIC4 JASPAR yes 12029724
chr16 85219464 85219474 SP1 JASPAR yes 12029725
chr16 85219465 85219475 SP1 JASPAR yes 12029726
chr16 85219471 85219477 MAZ TRANSFAC yes 12029727
Genes associated with rs143220642[chr16:85219471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More