EnhancerDB
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  3. rs143223240[chr12:122588573]
Enhancers that have rs143223240[chr12:122588573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122578829 122604895 enh2657
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143223240[chr12:122588573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122588566 122588577 STAT1 JASPAR yes 124266155
chr12 122588566 122588577 STAT3 JASPAR yes 124266156
chr12 122588569 122588573 H1TF2 TRANSFAC yes 124266157
chr12 122588569 122588573 NFE TRANSFAC yes 124266158
chr12 122588569 122588573 SRF TRANSFAC yes 124266159
chr12 122588569 122588579 HOXA13 JASPAR yes 124266160
chr12 122588569 122588579 HOXB13 JASPAR yes 124266161
chr12 122588569 122588579 HOXD13 JASPAR yes 124266162
Genes associated with rs143223240[chr12:122588573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More