EnhancerDB
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  3. rs143362729[chr17:2752304]
Enhancers that have rs143362729[chr17:2752304]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143362729[chr17:2752304]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2752300 2752309 SNAI2 JASPAR yes 52776955
chr17 2752300 2752310 FIGLA JASPAR yes 52776956
chr17 2752300 2752310 ID4 JASPAR yes 52776957
chr17 2752300 2752310 TCF3 JASPAR yes 52776958
chr17 2752300 2752310 TCF4 JASPAR yes 52776959
chr17 2752302 2752311 ZEB1 JASPAR yes 52776960
chr17 2752302 2752312 TBX21 JASPAR yes 52776961
chr17 2752303 2752311 MGA JASPAR yes 52776962
chr17 2752303 2752311 TBX15 JASPAR yes 52776963
chr17 2752303 2752311 TBX1 JASPAR yes 52776964
chr17 2752303 2752311 TBX4 JASPAR yes 52776965
chr17 2752303 2752311 TBX5 JASPAR yes 52776966
chr17 2752303 2752313 TBR1 JASPAR yes 52776967
Genes associated with rs143362729[chr17:2752304], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More