EnhancerDB
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  3. rs143365309[chr5:172436624]
Enhancers that have rs143365309[chr5:172436624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172432905 172446573 enh22818
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs143365309[chr5:172436624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172436619 172436629 SP1 JASPAR yes 67847563
chr5 172436619 172436638 PAX5 JASPAR yes 67847564
chr5 172436622 172436627 SP1 TRANSFAC yes 67847565
Genes associated with rs143365309[chr5:172436624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More