EnhancerDB
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  3. rs143393324[chr1:234879247]
Enhancers that have rs143393324[chr1:234879247]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143393324[chr1:234879247]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397133
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397134
chr1 234878419 234883607 ZNF274 GTRD no Blood (GM12878) 107881636
chr1 234878974 234883568 ZNF274 GTRD no Blood (GM12878) 107881637
chr1 234878977 234880078 ZNF274 GTRD no Liver (HepG2) 21397472
chr1 234878982 234883403 ZNF274 GTRD no Blood (GM12878) 107881638
chr1 234879020 234879570 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21397473
chr1 234879031 234880068 ZNF274 GTRD no Bone Marrow (K562) 21397474
chr1 234879051 234880925 ZNF274 GTRD no Bone Marrow (K562) 21397475
chr1 234879122 234879740 ZNF274 GTRD no Liver (HepG2) 21397476
chr1 234879175 234879984 ZNF274 GTRD no Bone Marrow (K562) 21397477
chr1 234879235 234879569 ZNF274 GTRD no Liver (HepG2) 21397478
chr1 234879238 234879248 MSC JASPAR yes 36310052
Genes associated with rs143393324[chr1:234879247], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More