EnhancerDB
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  3. rs143447256[chr5:77801217]
Enhancers that have rs143447256[chr5:77801217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143447256[chr5:77801217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77801212 77801221 SNAI2 JASPAR yes 63593811
chr5 77801213 77801218 USF2 TRANSFAC yes 63593812
chr5 77801217 77801228 FOXH1 JASPAR yes 63593813
Genes associated with rs143447256[chr5:77801217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More