EnhancerDB
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  3. rs143504886[chr1:39595040]
Enhancers that have rs143504886[chr1:39595040]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143504886[chr1:39595040]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39595029 39595043 FOXF2 JASPAR yes 28255194
chr1 39595031 39595042 FOXC1 JASPAR yes 28255195
chr1 39595031 39595043 FOXC2 JASPAR yes 28255196
chr1 39595032 39595044 FOXI1 JASPAR yes 28255197
Genes associated with rs143504886[chr1:39595040], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More