EnhancerDB
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  3. rs143519682[chr1:173375421]
Enhancers that have rs143519682[chr1:173375421]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs143519682[chr1:173375421]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173374867 173375517 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351245
chr1 173374907 173375423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351247
chr1 173374922 173375426 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351248
chr1 173374979 173375455 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351257
chr1 173374995 173375451 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351260
chr1 173375106 173375430 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21351266
chr1 173375296 173375770 ZNF274 GTRD no Liver (HepG2) 21351268
chr1 173375405 173375771 ZNF274 GTRD no Liver (HepG2) 21351269
chr1 173375411 173375425 POU1F1 JASPAR yes 33195897
chr1 173375415 173375429 FOXF2 JASPAR yes 33195899
chr1 173375416 173375427 FOXA1 JASPAR yes 33195900
chr1 173375416 173375431 FOXA1 JASPAR yes 33195901
chr1 173375417 173375423 JUN TRANSFAC yes 33195902
chr1 173375417 173375428 FOXB1 JASPAR yes 33195903
chr1 173375417 173375428 FOXC1 JASPAR yes 33195904
chr1 173375418 173375429 FOXP2 JASPAR yes 33195905
chr1 173375420 173375427 FOXD2 JASPAR yes 33195906
chr1 173375420 173375427 FOXI1 JASPAR yes 33195907
chr1 173375420 173375427 FOXL1 JASPAR yes 33195908
chr1 173375420 173375427 FOXO4 JASPAR yes 33195909
chr1 173375420 173375427 FOXO6 JASPAR yes 33195910
chr1 173375420 173375427 FOXP3 JASPAR yes 33195911
chr1 173375420 173375428 FOXD1 JASPAR yes 33195912
chr1 173375420 173375428 FOXO3 JASPAR yes 33195913
Genes associated with rs143519682[chr1:173375421], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More