EnhancerDB
  1. Home
  2. SNP
  3. rs143539174[chr16:4342710]
Enhancers that have rs143539174[chr16:4342710]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143539174[chr16:4342710]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4342704 4342711 SP1 TRANSFAC yes 9267557
chr16 4342704 4342714 SP1 JASPAR yes 9267558
chr16 4342705 4342716 E2F1 JASPAR yes 9267559
chr16 4342706 4342711 SP1 TRANSFAC yes 9267560
chr16 4342706 4342717 E2F4 JASPAR yes 9267561
chr16 4342706 4342717 E2F6 JASPAR yes 9267562
chr16 4342707 4342712 SP1 TRANSFAC yes 9267563
Genes associated with rs143539174[chr16:4342710], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More