EnhancerDB
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  3. rs143549369[chr1:39659090]
Enhancers that have rs143549369[chr1:39659090]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143549369[chr1:39659090]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39659080 39659091 FOS JASPAR yes 28265429
chr1 39659081 39659092 FOSL2 JASPAR yes 28265430
chr1 39659081 39659092 JUNB JASPAR yes 28265431
Genes associated with rs143549369[chr1:39659090], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More