EnhancerDB
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  3. rs143568409[chr12:109245036]
Enhancers that have rs143568409[chr12:109245036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109230004 109245900 enh14979
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143568409[chr12:109245036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109245030 109245041 HOXA10 JASPAR yes 123627431
chr12 109245031 109245040 CDX1 JASPAR yes 123627432
chr12 109245031 109245041 HOXA13 JASPAR yes 123627433
chr12 109245031 109245041 HOXD13 JASPAR yes 123627434
Genes associated with rs143568409[chr12:109245036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More