EnhancerDB
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  3. rs143574290[chr1:235120868]
Enhancers that have rs143574290[chr1:235120868]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143574290[chr1:235120868]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235119925 235121066 TEF1 GTRD no Bone (Osteoblast) 21402606
chr1 235119925 235121066 TEF1 GTRD no Bone (Osteoblast) 107885394
chr1 235120867 235120871 H4TF2 TRANSFAC yes 36338450
Genes associated with rs143574290[chr1:235120868], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More