EnhancerDB
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  3. rs143606004[chr1:23439472]
Enhancers that have rs143606004[chr1:23439472]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs143606004[chr1:23439472]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23439462 23439472 TBX21 JASPAR yes 27413740
chr1 23439462 23439473 TBX2 JASPAR yes 27413741
chr1 23439462 23439475 EOMES JASPAR yes 27413742
chr1 23439463 23439473 TBR1 JASPAR yes 27413748
Genes associated with rs143606004[chr1:23439472], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More