EnhancerDB
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  3. rs143609979[chr17:78653271]
Enhancers that have rs143609979[chr17:78653271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs143609979[chr17:78653271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78653254 78653275 IRF1 JASPAR yes 56266951
chr17 78653255 78653276 IRF1 JASPAR yes 56266952
chr17 78653256 78653271 STAT2 JASPAR yes 56266953
chr17 78653257 78653271 STAT1 JASPAR yes 56266954
chr17 78653258 78653272 STAT1 JASPAR yes 56266955
chr17 78653259 78653271 IRF1 JASPAR yes 56266956
chr17 78653259 78653277 IRF2 JASPAR yes 56266957
chr17 78653260 78653281 IRF1 JASPAR yes 56266958
chr17 78653262 78653277 STAT2 JASPAR yes 56266959
chr17 78653267 78653272 ETS2 TRANSFAC yes 56266960
Genes associated with rs143609979[chr17:78653271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More