EnhancerDB
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  3. rs143618781[chr1:27977213]
Enhancers that have rs143618781[chr1:27977213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27968485 27992074 enh178
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 27976905 27977430 vista945
VISTA
Transcript factors that have rs143618781[chr1:27977213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27976757 27977233 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107802610
chr1 27977206 27977222 RFX3 JASPAR yes 27718280
chr1 27977206 27977222 RFX3 JASPAR yes 118259931
chr1 27977211 27977220 SOX9 JASPAR yes 27718281
chr1 27977211 27977220 SOX9 JASPAR yes 118259932
Genes associated with rs143618781[chr1:27977213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More